Publikationer fra forskningsgruppen for Genetisk epidemiologi

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2020
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Four European Salmonella Typhimurium datasets collected to develop WGS-based source attribution methods

Munck, Nanna Sophia Mucha ; Leekitcharoenphon, Pimlapas ; Litrup, Eva ; Kaas, Rolf Sommer ; Meinen, Anika ; Guillier, Laurent ; Tang, Yue ; Malorny, Burkhard ; Palma, Federica ; Borowiak, Maria ; Gourmelon, Michèle ; Simon, Sandra ; Banerji, Sangeeta ; Petrovska, Liljana ; Dallman, Timothy J ; Hald, Tine
in: Scientific Data, vol: 7, issue: 1

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1038/s41597-020-0417-7

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Global, regional, and national burden of chronic kidney disease, 1990–2017

Bikbov, Boris ; Purcell, Caroline A. ; Levey, Andrew S. ; Smith, Mari ; Abdoli, Amir ; Abebe, Molla ; Adebayo, Oladimeji M. ; Afarideh, Mohsen ; Agarwal, Sanjay Kumar ; Agudelo-Botero, Marcela ; Ahmadian, Elham ; Al-Aly, Ziyad ; Alipour, Vahid ; Almasi-Hashiani, Amir ; Al-Raddadi, Rajaa M. ; Alvis-Guzman, Nelson ; Amini, Saeed ; Andrei, Tudorel ; Andrei, Catalina Liliana ; Andualem, Zewudu ; Anjomshoa, Mina ; Arabloo, Jalal ; Ashagre, Alebachew Fasil ; Asmelash, Daniel ; Ataro, Zerihun ; Atout, Maha Moh d.Wahbi ; Ayanore, Martin Amogre ; Badawi, Alaa ; Bakhtiari, Ahad ; Ballew, Shoshana H. ; Balouchi, Abbas ; Banach, Maciej ; Barquera, Simon ; Basu, Sanjay ; Bayih, Mulat Tirfie ; Bedi, Neeraj ; Bello, Aminu K. ; Bensenor, Isabela M. ; Bijani, Ali ; Boloor, Archith ; Borzì, Antonio M. ; Cámera, Luis Alberto ; Carrero, Juan J. ; Carvalho, Félix ; Castro, Franz ; Catalá-López, Ferrán ; Chang, Alex R. ; Chin, Ken Lee ; Chung, Sheng Chia ; Cirillo, Massimo ; Cousin, Ewerton ; Dandona, Lalit ; Dandona, Rakhi ; Daryani, Ahmad ; Das Gupta, Rajat ; Demeke, Feleke Mekonnen ; Demoz, Gebre Teklemariam ; Desta, Desilu Mahari ; Do, Huyen Phuc ; Duncan, Bruce B. ; Eftekhari, Aziz ; Esteghamati, Alireza ; Fatima, Syeda Sadia ; Fernandes, João C. ; Fernandes, Eduarda ; Fischer, Florian ; Freitas, Marisa ; Gad, Mohamed M. ; Gebremeskel, Gebreamlak Gebremedhn ; Gebresillassie, Begashaw Melaku ; Geta, Birhanu ; Ghafourifard, Mansour ; Ghajar, Alireza ; Ghith, Nermin ; Gill, Paramjit Singh ; Ginawi, Ibrahim Abdelmageed ; Gupta, Rajeev ; Hafezi-Nejad, Nima ; Haj-Mirzaian, Arvin ; Haj-Mirzaian, Arya ; Hariyani, Ninuk ; Hasan, Mehedi ; Hasankhani, Milad ; Hasanzadeh, Amir ; Hassen, Hamid Yimam ; Hay, Simon I. ; Heidari, Behnam ; Herteliu, Claudiu ; Hoang, Chi Linh ; Hosseini, Mostafa ; Hostiuc, Mihaela ; Irvani, Seyed Sina Naghibi ; Islam, Sheikh Mohammed Shariful ; Jafari Balalami, Nader ; James, Spencer L. ; Jassal, Simerjot K. ; Jha, Vivekanand ; Jonas, Jost B. ; Joukar, Farahnaz ; Jozwiak, Jacek Jerzy ; Kabir, Ali ; Kahsay, Amaha ; Kasaeian, Amir ; Kassa, Tesfaye Dessale ; Kassaye, Hagazi Gebremedhin ; Khader, Yousef Saleh ; Khalilov, Rovshan ; Khan, Ejaz Ahmad ; Khan, Mohammad Saud ; Khang, Young Ho ; Kisa, Adnan ; Kovesdy, Csaba P. ; Kuate Defo, Barthelemy ; Kumar, G. Anil ; Larsson, Anders O. ; Lim, Lee Ling ; Lopez, Alan D. ; Lotufo, Paulo A. ; Majeed, Azeem ; Malekzadeh, Reza ; März, Winfried ; Masaka, Anthony ; Meheretu, Hailemariam Abiy Alemu ; Miazgowski, Tomasz ; Mirica, Andreea ; Mirrakhimov, Erkin M. ; Mithra, Prasanna ; Moazen, Babak ; Mohammad, Dara K. ; Mohammadpourhodki, Reza ; Mohammed, Shafiu ; Mokdad, Ali H. ; Morales, Linda ; Moreno Velasquez, Ilais ; Mousavi, Seyyed Meysam ; Mukhopadhyay, Satinath ; Nachega, Jean B. ; Nadkarni, Girish N. ; Nansseu, Jobert Richie ; Natarajan, Gopalakrishnan ; Nazari, Javad ; Neal, Bruce ; Negoi, Ruxandra Irina ; Nguyen, Cuong Tat ; Nikbakhsh, Rajan ; Noubiap, Jean Jacques ; Nowak, Christoph ; Olagunju, Andrew T. ; Ortiz, Alberto ; Owolabi, Mayowa Ojo ; Palladino, Raffaele ; Pathak, Mona ; Poustchi, Hossein ; Prakash, Swayam ; Prasad, Narayan ; Rafiei, Alireza ; Raju, Sree Bhushan ; Ramezanzadeh, Kiana ; Rawaf, Salman ; Rawaf, David Laith ; Rawal, Lal ; Reiner, Robert C. ; Rezapour, Aziz ; Ribeiro, Daniel Cury ; Roever, Leonardo ; Rothenbacher, Dietrich ; Rwegerera, Godfrey M. ; Saadatagah, Seyedmohammad ; Safari, Saeed ; Sahle, Berhe Weldearegawi ; Salem, Hosni ; Sanabria, Juan ; Santos, Itamar S. ; Sarveazad, Arash ; Sawhney, Monika ; Schaeffner, Elke ; Schmidt, Maria Inês ; Schutte, Aletta Elisabeth ; Sepanlou, Sadaf G. ; Shaikh, Masood Ali ; Sharafi, Zeinab ; Sharif, Mehdi ; Sharifi, Amrollah ; Silva, Diego Augusto Santos ; Singh, Jasvinder A. ; Singh, Narinder Pal ; Sisay, Malede Mequanent M. ; Soheili, Amin ; Sutradhar, Ipsita ; Teklehaimanot, Berhane Fseha ; Tesfay, Berhe etsay ; Teshome, Getnet Fetene ; Thakur, Jarnail Singh ; Tonelli, Marcello ; Tran, Khanh Bao ; Tran, Bach Xuan ; Tran Ngoc, Candide ; Ullah, Irfan ; Valdez, Pascual R. ; Varughese, Santosh ; Vos, Theo ; Vu, Linh Gia ; Waheed, Yasir ; Werdecker, Andrea ; Wolde, Haileab Fekadu ; Wondmieneh, Adam Belay ; Wulf Hanson, Sarah ; Yamada, Tomohide ; Yeshaw, Yigizie ; Yonemoto, Naohiro ; Yusefzadeh, Hasan ; Zaidi, Zoubida ; Zaki, Leila ; Zaman, Sojib Bin ; Zamora, Nelson ; Zarghi, Afshin ; Zewdie, Kaleab Alemayehu ; Ärnlöv, Johan ; Coresh, Josef ; Perico, Norberto ; Remuzzi, Giuseppe ; Murray, Chris J.L.
in: The Lancet, vol: 395, issue: 10225, pages: 709-733

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1016/S0140-6736(20)30045-3

 

Inactivation of hepatitis A virus and murine norovirus on surfaces of plastic, steel and raspberries using steam-ultrasound treatment

Rajiuddin, Sheikh Md ; Vigre, Håkan ; Musavian, Hanieh Sadat ; Kohle, Simon ; Krebs, Niels ; Hansen, Tina Beck ; Gantzer, Christophe ; Schultz, Anna Charlotte
in: Food and Environmental Virology

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    År: 2020     |    DOI: https://doi.org/10.1007/s12560-020-09441-1

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In Silico Genotyping of Escherichia coli Isolates for Extraintestinal Virulence Genes by Use of Whole-Genome Sequencing Data

Malberg Tetzschner, Anna Maria ; Johnson, James R. ; Johnston, Brian D. ; Lund, Ole ; Scheutz, Flemming
in: Journal of Clinical Microbiology, vol: 58, issue: 10

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1128/JCM.01269-20

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Measuring universal health coverage based on an index of effective coverage of health services in 204 countries and territories, 1990–2019

Lozano, Rafael ; Fullman, Nancy ; Mumford, John Everett ; Knight, Megan ; Barthelemy, Celine M. ; Abbafati, Cristiana ; Abbastabar, Hedayat ; Abd-Allah, Foad ; Abdollahi, Mohammad ; Abedi, Aidin ; Abolhassani, Hassan ; Abosetugn, Akine Eshete ; Abreu, Lucas Guimarães ; Abrigo, Michael R.M. ; Abu Haimed, Abdulaziz Khalid ; Abushouk, Abdelrahman I. ; Adabi, Maryam ; Adebayo, Oladimeji M. ; Adekanmbi, Victor ; Adelson, Jaimie ; Adetokunboh, Olatunji O. ; Adham, Davoud ; Advani, Shailesh M. ; Afshin, Ashkan ; Agarwal, Gina ; Agasthi, Pradyumna ; Aghamir, Seyed Mohammad Kazem ; Agrawal, Anurag ; Ahmad, Tauseef ; Akinyemi, Rufus Olusola ; Alahdab, Fares ; Al-Aly, Ziyad ; Alam, Khurshid ; Albertson, Samuel B. ; Alemu, Yihun Mulugeta ; Alhassan, Robert Kaba ; Ali, Muhammad ; Ali, Saqib ; Alipour, Vahid ; Aljunid, Syed Mohamed ; Alla, François ; Almadi, Majid Abdulrahman Hamad ; Almasi, Ali ; Almasi-Hashiani, Amir ; Almasri, Nihad A. ; Al-Mekhlafi, Hesham M. ; Almulhim, Abdulaziz M. ; Alonso, Jordi ; Al-Raddadi, Rajaa M. ; Altirkawi, Khalid A. ; Alvis-Guzman, Nelson ; Alvis-Zakzuk, Nelson J. ; Amini, Saeed ; Amini-Rarani, Mostafa ; Amiri, Fatemeh ; Amit, Arianna Maever L. ; Amugsi, Dickson A. ; Ancuceanu, Robert ; Anderlini, Deanna ; Andrei, Catalina Liliana ; Androudi, Sofia ; Ansari, Fereshteh ; Ansari-Moghaddam, Alireza ; Antonio, Carl Abelardo T. ; Antony, Catherine M. ; Antriyandarti, Ernoiz ; Anvari, Davood ; Anwer, Razique ; Arabloo, Jalal ; Arab-Zozani, Morteza ; Aravkin, Aleksandr Y. ; Aremu, Olatunde ; Ärnlöv, Johan ; Asaad, Malke ; Asadi-Aliabadi, Mehran ; Asadi-Pooya, Ali A. ; Ashbaugh, Charlie ; Athari, Seyyed Shamsadin ; Atout, Maha Moh d.Wahbi ; Ausloos, Marcel ; Avila-Burgos, Leticia ; Ayala Quintanilla, Beatriz Paulina ; Ayano, Getinet ; Ayanore, Martin Amogre ; Aynalem, Yared Asmare ; Aynalem, Getie Lake ; Ayza, Muluken Altaye ; Azari, Samad ; Azzopardi, Peter S. ; B, Darshan B. ; Babaee, Ebrahim ; Badiye, Ashish D. ; Bahrami, Mohammad Amin ; Baig, Atif Amin ; Bakhshaei, Mohammad Hossein ; Bakhtiari, Ahad ; Bakkannavar, Shankar M. ; Balachandran, Arun ; Balassyano, Shelly ; Banach, Maciej ; Banerjee, Srikanta K. ; Banik, Palash Chandra ; Bante, Agegnehu Bante ; Bante, Simachew Animen ; Barker-Collo, Suzanne Lyn ; Bärnighausen, Till Winfried ; Barrero, Lope H. ; Bassat, Quique ; Basu, Sanjay ; Baune, Bernhard T. ; Bayati, Mohsen ; Baye, Bayisa Abdissa ; Bedi, Neeraj ; Beghi, Ettore ; Behzadifar, Masoud ; Bekuma, Tariku Tesfaye Tesfaye ; Bell, Michelle L. ; Bensenor, Isabela M. ; Berman, Adam E. ; Bernabe, Eduardo ; Bernstein, Robert S. ; Bhagavathula, Akshaya Srikanth ; Bhandari, Dinesh ; Bhardwaj, Pankaj ; Bhat, Anusha Ganapati ; Bhattacharyya, Krittika ; Bhattarai, Suraj ; Bhutta, Zulfiqar A. ; Bijani, Ali ; Bikbov, Boris ; Bilano, Ver ; Biondi, Antonio ; Birihane, Binyam Minuye ; Bockarie, Moses John ; Bohlouli, Somayeh ; Bojia, Hunduma Amensisa ; Bolla, Srinivasa Rao Rao ; Boloor, Archith ; Brady, Oliver J. ; Braithwaite, Dejana ; Briant, Paul Svitil ; Briggs, Andrew M. ; Briko, Nikolay Ivanovich ; Burugina Nagaraja, Sharath ; Busse, Reinhard ; Butt, Zahid A. ; Caetano dos Santos, Florentino Luciano ; Cahuana-Hurtado, Lucero ; Cámera, Luis Alberto ; Cárdenas, Rosario ; Carreras, Giulia ; Carrero, Juan J. ; Carvalho, Felix ; Castaldelli-Maia, Joao Mauricio ; Castañeda-Orjuela, Carlos A. ; Castelpietra, Giulio ; Castro, Franz ; Catalá-López, Ferrán ; Causey, Kate ; Cederroth, Christopher R. ; Cercy, Kelly M. ; Cerin, Ester ; Chandan, Joht Singh ; Chang, Angela Y. ; Charan, Jaykaran ; Chattu, Vijay Kumar ; Chaturvedi, Sarika ; Chin, Ken Lee ; Cho, Daniel Youngwhan ; Choi, Jee Young Jasmine ; Christensen, Hanne ; Chu, Dinh Toi ; Chung, Michael T. ; Ciobanu, Liliana G. ; Cirillo, Massimo ; Comfort, Haley ; Compton, Kelly ; Cortesi, Paolo Angelo ; Costa, Vera Marisa ; Cousin, Ewerton ; Dahlawi, Saad M.A. ; Damiani, Giovanni ; Dandona, Lalit ; Dandona, Rakhi ; Darega Gela, Jiregna ; Darwesh, Aso Mohammad ; Daryani, Ahmad ; Dash, Aditya Prasad ; Davey, Gail ; Dávila-Cervantes, Claudio Alberto ; Davletov, Kairat ; De Neve, Jan Walter ; Denova-Gutiérrez, Edgar ; Deribe, Kebede ; Dervenis, Nikolaos ; Desai, Rupak ; Dharmaratne, Samath Dhamminda ; Dhungana, Govinda Prasad ; Dianatinasab, Mostafa ; Dias da Silva, Diana ; Diaz, Daniel ; Dippenaar, Ilse N. ; Do, Hoa Thi ; Dorostkar, Fariba ; Doshmangir, Leila ; Duncan, Bruce B. ; Duraes, Andre Rodrigues ; Eagan, Arielle Wilder ; Edvardsson, David ; El Sayed, Iman ; El Tantawi, Maha ; Elgendy, Islam Y. ; Elyazar, Iqbal RF ; Eskandari, Khalil ; Eskandarieh, Sharareh ; Esmaeilnejad, Saman ; Esteghamati, Alireza ; Ezekannagha, Oluchi ; Farag, Tamer ; Farahmand, Mohammad ; Faraon, Emerito Jose A. ; Farinha, Carla Sofia e.Sá ; Farioli, Andrea ; Faris, Pawan Sirwan ; Faro, Andre ; Fazlzadeh, Mehdi ; Feigin, Valery L. ; Fernandes, Eduarda ; Ferrara, Pietro ; Feyissa, Garumma Tolu ; Filip, Irina ; Fischer, Florian ; Fisher, James L. ; Flor, Luisa Sorio ; Foigt, Nataliya A. ; Folayan, Morenike Oluwatoyin ; Fomenkov, Artem Alekseevich ; Foroutan, Masoud ; Francis, Joel Msafiri ; Fu, Weijia ; Fukumoto, Takeshi ; Furtado, João M. ; Gad, Mohamed M. ; Gaidhane, Abhay Motiramji ; Gakidou, Emmanuela ; Galles, Natalie C. ; Gallus, Silvano ; Gardner, William M. ; Geberemariyam, Biniyam Sahiledengle ; Gebrehiwot, Abiyu Mekonnen ; Gebremeskel, Leake G. ; Gebremeskel, Gebreamlak Gebremedhn ; Gesesew, Hailay Abrha ; Ghadiri, Keyghobad ; Ghafourifard, Mansour ; Ghashghaee, Ahmad ; Ghith, Nermin ; Gholamian, Asadollah ; Gilani, Syed Amir ; Gill, Paramjit Singh ; Gill, Tiffany K. ; Ginindza, Themba G. ; Gitimoghaddam, Mojgan ; Giussani, Giorgia ; Glagn, Mustefa ; Gnedovskaya, Elena V. ; Godinho, Myron Anthony ; Goharinezhad, Salime ; Gopalani, Sameer Vali ; Goudarzian, Amir Hossein ; Goulart, Bárbara Niegia Garcia ; Gubari, Mohammed Ibrahim Mohialdeen ; Guimarães, Rafael Alves ; Guled, Rashid Abdi ; Gultie, Teklemariam ; Guo, Yuming ; Gupta, Rajeev ; Gupta, Rahul ; Hafezi-Nejad, Nima ; Hafiz, Abdul ; Haile, Teklehaimanot Gereziher ; Hamadeh, Randah R. ; Hameed, Sajid ; Hamidi, Samer ; Han, Chieh ; Han, Hannah ; Handiso, Demelash Woldeyohannes ; Hanif, Asif ; Hankey, Graeme J. ; Haro, Josep Maria ; Hasaballah, Ahmed I. ; Hasan, Md Mehedi ; Hashi, Abdiwahab ; Hassan, Shoaib ; Hassan, Amr ; Hassanipour, Soheil ; Hassankhani, Hadi ; Havmoeller, Rasmus J. ; Hay, Simon I. ; Hayat, Khezar ; Heidari, Golnaz ; Heidari-Soureshjani, Reza ; Hendrie, Delia ; Herteliu, Claudiu ; Hird, Thomas R. ; Ho, Hung Chak ; Hole, Michael K. ; Holla, Ramesh ; Hollingsworth, Bruce ; Hoogar, Praveen ; Hopf, Kathleen Pillsbury ; Horita, Nobuyuki ; Hossain, Naznin ; Hosseini, Mostafa ; Hosseinzadeh, Mehdi ; Hostiuc, Mihaela ; Hostiuc, Sorin ; Househ, Mowafa ; Hsieh, Vivian Chia rong ; Hu, Guoqing ; Huda, Tanvir M. ; Humayun, Ayesha ; Hwang, Bing Fang ; Iavicoli, Ivo ; Ibitoye, Segun Emmanuel ; Ikeda, Nayu ; Ilesanmi, Olayinka Stephen ; Ilic, Irena M. ; Ilic, Milena D. ; Inbaraj, Leeberk Raja ; Iqbal, Usman ; Irvani, Seyed Sina Naghibi ; Irvine, Caleb Mackay Salpeter ; Islam, M. Mofizul ; Islam, Sheikh Mohammed Shariful ; Islami, Farhad ; Iso, Hiroyasu ; Iwu, Chinwe Juliana ; Iwu, Chidozie C.D. ; Jaafari, Jalil ; Jadidi-Niaragh, Farhad ; Jafarinia, Morteza ; Jahagirdar, Deepa ; Jahani, Mohammad Ali ; Jahanmehr, Nader ; Jakovljevic, Mihajlo ; Janjani, Hosna ; Javaheri, Tahereh ; Jayatilleke, Achala Upendra ; Jenabi, Ensiyeh ; Jha, Ravi Prakash ; Jha, Vivekanand ; Ji, John S. ; Jia, Peng ; John-Akinola, Yetunde O. ; Jonas, Jost B. ; Joukar, Farahnaz ; Jozwiak, Jacek Jerzy ; Jürisson, Mikk ; Kabir, Zubair ; Kalankesh, Leila R. ; Kalhor, Rohollah ; Kamath, Aruna M. ; Kanchan, Tanuj ; Kapoor, Neeti ; Karami Matin, Behzad ; Karanikolos, Marina ; Karimi, Seyed M. ; Kassebaum, Nicholas J. ; Katikireddi, Srinivasa Vittal ; Kayode, Gbenga A. ; Keiyoro, Peter Njenga ; Khader, Yousef Saleh ; Khammarnia, Mohammad ; Khan, Maseer ; Khan, Ejaz Ahmad ; Khang, Young Ho ; Khatab, Khaled ; Khater, Amir M. ; Khater, Mona M. ; Khatib, Mahalaqua Nazli ; Khayamzadeh, Maryam ; Khubchandani, Jagdish ; Kianipour, Neda ; Kim, Young Eun ; Kim, Yun Jin ; Kimokoti, Ruth W. ; Kinfu, Yohannes ; Kisa, Adnan ; Kissimova-Skarbek, Katarzyna ; Kivimäki, Mika ; Kneib, Cameron J. ; Kocarnik, Jonathan M. ; Kochhar, Sonali ; Kohler, Stefan ; Kopec, Jacek A. ; Korotkova, Anna V. ; Korshunov, Vladimir Andreevich ; Kosen, Soewarta ; Kotlo, Anirudh ; Koul, Parvaiz A. ; Koyanagi, Ai ; Krishan, Kewal ; Krohn, Kris J. ; Kugbey, Nuworza ; Kulkarni, Vaman ; Kumar, G. Anil ; Kumar, Nithin ; Kumar, Manasi ; Kurmi, Om P. ; Kusuma, Dian ; Kyu, Hmwe Hmwe ; La Vecchia, Carlo ; Lacey, Ben ; Lal, Dharmesh Kumar ; Lalloo, Ratilal ; Landires, Iván ; Lansingh, Van Charles ; Larsson, Anders O. ; Lasrado, Savita ; Lau, Kathryn Mei Ming ; Lauriola, Paolo ; Lazarus, Jeffrey V. ; Ledesma, Jorge R. ; Lee, Paul H. ; Lee, Shaun Wen Huey ; Leever, Andrew T. ; LeGrand, Kate E. ; Leigh, James ; Leonardi, Matilde ; Li, Shanshan ; Lim, Stephen S. ; Lim, Lee Ling ; Liu, Xuefeng ; Logroscino, Giancarlo ; Lopez, Alan D. ; Lopukhov, Platon D. ; Lotufo, Paulo A. ; Lu, Alton ; Ma, Jianing ; Madadin, Mohammed ; Mahasha, Phetole Walter ; Mahmoudi, Morteza ; Majeed, Azeem ; Malagón-Rojas, Jeadran N. ; Maleki, Shokofeh ; Malta, Deborah Carvalho ; Mansouri, Borhan ; Mansournia, Mohammad Ali ; Martini, Santi ; Martins-Melo, Francisco Rogerlândio ; Martopullo, Ira ; Massenburg, Benjamin Ballard ; Mastrogiacomo, Claudia I. ; Mathur, Manu Raj ; McAlinden, Colm ; McKee, Martin ; Medina-Solís, Carlo Eduardo ; Meharie, Birhanu Geta ; Mehndiratta, Man Mohan ; Mehrabi Nasab, Entezar ; Mehri, Fereshteh ; Mehrotra, Ravi ; Mekonnen, Teferi ; Melese, Addisu ; Memiah, Peter T.N. ; Mendoza, Walter ; Menezes, Ritesh G. ; Mensah, George A. ; Meretoja, Tuomo J. ; Meretoja, Atte ; Mestrovic, Tomislav ; Miazgowski, Bartosz ; Michalek, Irmina Maria ; Mirrakhimov, Erkin M. ; Mirzaei, Maryam ; Mirzaei-Alavijeh, Mehdi ; Mitchell, Philip B. ; Moazen, Babak ; Moghadaszadeh, Masoud ; Mohamadi, Efat ; Mohammad, Yousef ; Mohammad, Dara K. ; Mohammad Gholi Mezerji, Naser ; Mohammadian-Hafshejani, Abdollah ; Mohammed, Shafiu ; Mohammed, Jemal Abdu ; Mokdad, Ali H. ; Monasta, Lorenzo ; Mondello, Stefania ; Moradi, Masoud ; Moradi-Lakeh, Maziar ; Moradzadeh, Rahmatollah ; Moraga, Paula ; Morgado-da-Costa, Joana ; Morrison, Shane Douglas ; Mosapour, Abbas ; Mosser, Jonathan F. ; Mousavi Khaneghah, Amin ; Muriithi, Moses K. ; Mustafa, Ghulam ; Nabhan, Ashraf F. ; Naderi, Mehdi ; Nagarajan, Ahamarshan Jayaraman ; Naghavi, Mohsen ; Naghshtabrizi, Behshad ; Naimzada, Mukhammad David ; Nangia, Vinay ; Nansseu, Jobert Richie ; Nayak, Vinod C. ; Nazari, Javad ; Ndejjo, Rawlance ; Negoi, Ionut ; Negoi, Ruxandra Irina ; Neupane, Subas ; Ngari, Kiirithio N. ; Nguefack-Tsague, Georges ; Ngunjiri, Josephine W. ; Nguyen, Cuong Tat ; Nguyen, Diep Ngoc ; Nguyen, Huong Lan Thi ; Nnaji, Chukwudi A. ; Nomura, Shuhei ; Norheim, Ole F. ; Noubiap, Jean Jacques ; Nowak, Christoph ; Nunez-Samudio, Virginia ; Otoiu, Adrian ; Ogbo, Felix Akpojene ; Oghenetega, Onome Bright ; Oh, In Hwan ; Okunga, Emmanuel Wandera ; Oladnabi, Morteza ; Olagunju, Andrew T. ; Olusanya, Jacob Olusegun ; Olusanya, Bolajoko Olubukunola ; Oluwasanu, Mojisola Morenike ; Omar Bali, Ahmed ; Omer, Muktar Omer ; Ong, Kanyin L. ; Onwujekwe, Obinna E. ; Ortega-Altamirano, Doris V.V. ; Ortiz, Alberto ; Ostojic, Sergej M. ; Otstavnov, Nikita ; Otstavnov, Stanislav S. ; Øverland, Simon ; Owolabi, Mayowa O. ; Padubidri, Jagadish Rao ; Pakhale, Smita ; Palladino, Raffaele ; Pana, Adrian ; Panda-Jonas, Songhomitra ; Pangaribuan, Helena Ullyartha ; Pathak, Mona ; Patton, George C. ; Paudel, Sagun ; Pazoki Toroudi, Hamidreza ; Pease, Spencer A. ; Peden, Amy E. ; Pennini, Alyssa ; Peprah, Emmanuel K. ; Pereira, Jeevan ; Pigott, David M. ; Pilgrim, Thomas ; Pilz, Tessa M. ; Pinheiro, Marina ; Piradov, Michael A. ; Pirsaheb, Meghdad ; Pokhrel, Khem Narayan ; Postma, Maarten J. ; Pourjafar, Hadi ; Pourmalek, Farshad ; Pourmirza Kalhori, Reza ; Pourshams, Akram ; Prada, Sergio I. ; Pribadi, Dimas Ria Angga ; Pupillo, Elisabetta ; Quazi Syed, Zahiruddin ; Radfar, Amir ; Rafiee, Ata ; Rafiei, Alireza ; Raggi, Alberto ; Rahim, Fakher ; Rahman, Muhammad Aziz ; Rajabpour-Sanati, Ali ; Rana, Saleem Muhammad ; Ranabhat, Chhabi Lal ; Rao, Sowmya J. ; Rasella, Davide ; Rashedi, Vahid ; Rath, Goura Kishor ; Rathi, Priya ; Rawaf, Salman ; Rawaf, David Laith ; Rawal, Lal ; Rawassizadeh, Reza ; Razo, Christian ; Renjith, Vishnu ; Renzaho, Andre M.N. ; Reshmi, Bhageerathy ; Rezaei, Nima ; Riahi, Seyed Mohammad ; Ribeiro, Daniel Cury ; Rickard, Jennifer ; Roberts, Nicholas L.S. ; Roever, Leonardo ; Romoli, Michele ; Ronfani, Luca ; Roshandel, Gholamreza ; Rubagotti, Enrico ; Rwegerera, Godfrey M. ; Sabour, Siamak ; Sachdev, Perminder S. ; Saddik, Basema ; Sadeghi, Masoumeh ; Sadeghi, Ehsan ; Safari, Yahya ; Sagar, Rajesh ; Sahebkar, Amirhossein ; Sahraian, Mohammad Ali ; Sajadi, S. Mohammad ; Salahshoor, Mohammad Reza ; Salem, Marwa R.Rashad ; Salem, Hosni ; Salomon, Joshua ; Samadi Kafil, Hossein ; Samy, Abdallah M. ; Sanabria, Juan ; Santric-Milicevic, Milena M. ; Saraswathy, Sivan Yegnanarayana Iyer ; Sarmiento-Suárez, Rodrigo ; Sartorius, Benn ; Sarveazad, Arash ; Sathian, Brijesh ; Sathish, Thirunavukkarasu ; Sattin, Davide ; Savic, Miloje ; Sawyer, Susan M. ; Saxena, Deepak ; Sbarra, Alyssa N. ; Schaeffer, Lauren E. ; Schiavolin, Silvia ; Schmidt, Maria Inês ; Schutte, Aletta Elisabeth ; Schwebel, David C. ; Schwendicke, Falk ; Seedat, Soraya ; Sha, Feng ; Shahabi, Saeed ; Shaheen, Amira A. ; Shaikh, Masood Ali ; Shamsizadeh, Morteza ; Shannawaz, Mohammed ; Sharafi, Kiomars ; Sharara, Fablina ; Sharifi, Hamid ; Shaw, David H. ; Sheikh, Aziz ; Sheikhtaheri, Abbas ; Shetty, B. Suresh Kumar ; Shibuya, Kenji ; Shiferaw, Wondimeneh Shibabaw ; Shigematsu, Mika ; Shin, Jae Il ; Shiri, Rahman ; Shirkoohi, Reza ; Shivakumar, K. 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in: The Lancet, vol: 396, issue: 10258, pages: 1250-1284

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1016/S0140-6736(20)30750-9

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Molecular Characteristics and Zoonotic Potential of Salmonella Weltevreden From Cultured Shrimp and Tilapia in Vietnam and China

Hounmanou, Yaovi M.G. ; Dalsgaard, Anders ; Sopacua, Tirzania Frannetta ; Uddin, Gazi Md Noor ; Leekitcharoenphon, Pimlapas ; Hendriksen, Rene S. ; Olsen, John E. ; Larsen, Marianne Halberg
in: Frontiers in Microbiology, vol: 11

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.3389/fmicb.2020.01985

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Molecular epidemiology of Salmonella Infantis in Europe: insights into the success of the bacterial host and its parasitic pESI-like megaplasmid

Alba, Patricia ; Leekitcharoenphon, Pimlapas ; Carfora, Virginia ; Amoruso, Roberta ; Cordaro, Gessica ; Di Matteo, Paola ; Ianzano, Angela ; Iurescia, Manuela ; Diaconu, Elena L ; Study Group, Engage-Eurl-Ar Network ; Karlsmose Pedersen, Susanne ; Guerra, Beatriz ; Hendriksen, Rene S. ; Franco, Alessia ; Battisti, Antonio
in: Microbial Genomics, vol: 6, issue: 5

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1099/mgen.0.000365

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Monitoring of Farm-Level Antimicrobial Use to Guide Stewardship

Sanders, Pim ; Vanderhaeghen, Wannes ; Fertner, Mette Ely ; Fuchs, Klemens ; Obritzhauser, Walter ; Agunos, Agnes ; Carson, Carolee ; Borck Høg, Birgitte ; Dalhoff Andersen, Vibe ; Chauvin, Claire ; Hémonic, Anne ; Käsbohrer, Annemarie ; Merle, Roswitha ; Alborali, Giovanni L. ; Scali, Federico ; Stärk, Katharina D.C. ; Muentener, Cedric ; van Geijlswijk, Ingeborg ; Broadfoot, Fraser ; Pokludová, Lucie ; Firth, Clair L. ; Carmo, Luís P. ; Manzanilla, Edgar Garcia ; Jensen, Laura Mark ; Sjölund, Marie ; Pinto Ferreira, Jorge ; Brown, Stacey ; Heederik, Dick ; Dewulf, Jeroen
in: Frontiers in Veterinary Science, vol: 7

Type: Review (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.3389/fvets.2020.00540

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Network Approach to Source Attribution of Salmonella enterica Serovar Typhimurium and Its Monophasic Variant

Merlotti, Alessandra ; Manfreda, Gerardo ; Munck, Nanna Sophia Mucha ; Hald, Tine ; Litrup, Eva ; Nielsen, Eva Møller ; Remondini, Daniel ; Pasquali, Frédérique
in: Frontiers in Microbiology, vol: 11

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.3389/fmicb.2020.01205

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Occupational Exposure and Carriage of Antimicrobial Resistance Genes (tetW, ermB) in Pig Slaughterhouse Workers

Van Gompel, Liese ; Dohmen, Wietske ; Luiken, Roosmarijn E. C. ; Bouwknegt, Martijn ; Heres, Lourens ; Van Heijnsbergen, Eri ; Jongerius-Gortemaker, Betty G M ; Scherpenisse, Peter ; Greve, Gerdit D ; Tersteeg-Zijderveld, Monique H G ; Wadepohl, Katharina ; Ribeiro Duarte, Ana Sofia ; Muñoz-Gómez, Violeta ; Fischer, Jennie ; Skarżyńska, Magdalena ; Wasyl, Dariusz ; Wagenaar, Jaap A ; Urlings, Bert A P ; Dorado-García, Alejandro ; Wouters, Inge M ; Heederik, Dick J J ; Schmitt, Heike ; Smit, Lidwien A M
in: Annals of Work Exposures and Health, vol: 64, issue: 2, pages: 125-137

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1093/annweh/wxz098

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Phylogenetic Investigation of Norovirus Transmission between Humans and Animals

Villabruna, Nele ; Izquierdo Lara, Ray W. ; Szarvas, Judit ; Koopmans, Marion P. G. ; de Graaf, Miranda
in: Viruses, vol: 12, issue: 11

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.3390/v12111287

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Proficiency Testing of Metagenomics-Based Detection of Food-Borne Pathogens Using a Complex Artificial Sequencing Dataset

Höper, Dirk ; Grützke, Josephine ; Brinkmann, Annika ; Mossong, Joël ; Matamoros, Sébastien ; Ellis, Richard J. ; Deneke, Carlus ; Tausch, Simon H. ; Cuesta, Isabel ; Monzón, Sara ; Juliá, Miguel ; Petersen, Thomas Nordahl ; Hendriksen, Rene S. ; Pamp, Sünje Joanna ; Leijon, Mikael ; Hakhverdyan, Mikhayil ; Walsh, Aaron M. ; Cotter, Paul D. ; Chandrasekaran, Lakshmi ; Tay, Moon Y.F. ; Schlundt, Joergen ; Sala, Claudia ; De Cesare, Alessandra ; Nitsche, Andreas ; Beer, Martin ; Wylezich, Claudia
in: Frontiers in Microbiology, vol: 11

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.3389/fmicb.2020.575377

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Quantitative Microbial Risk Assessment Based on Whole Genome Sequencing Data

Njage, Patrick Murigu Kamau ; Leekitcharoenphon, Pimlapas ; Hansen, Lisbeth Truelstrup ; Hendriksen, Rene S. ; Faes, Christel ; Aerts, Marc ; Hald, Tine
in: Microorganisms, vol: 8, issue: 11

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.3390/microorganisms8111772

 

Sequence Analysis of Plasmids in Vibrio anguillarum from Different Fish and Locations

Akter, Tasmina ; Lindegaard, Mikkel ; Pedersen, Karl ; Strube, Mikael Lenz ; Ronco, Troels ; Dalsgaard, Inger
in: Journal of Aquatic Animal Health, vol: 32, issue: 1, pages: 21-27

Type: Journal article

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1002/aah.10093

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Setting a baseline for global urban virome surveillance in sewage

, ; Nieuwenhuijse, David F. ; Oude Munnink, Bas B. ; Phan, My V.T. ; Hendriksen, Rene S. ; Bego, Artan ; Rees, Catherine ; Neilson, Elizabeth Heather ; Coventry, Kris ; Collignon, Peter ; Allerberger, Franz ; Rahube, Teddie O. ; Oliveira, Guilherme ; Ivanov, Ivan ; Sopheak, Thet ; Vuthy, Yith ; Yost, Christopher K. ; Tabo, Djim adjim ; Cuadros-Orellana, Sara ; Ke, Changwen ; Zheng, Huanying ; Baisheng, Li ; Jiao, Xiaoyang ; Donado-Godoy, Pilar ; Coulibaly, Kalpy Julien ; Hrenovic, Jasna ; Jergović, Matijana ; Karpíšková, Renáta ; Elsborg, Bodil ; Legesse, Mengistu ; Eguale, Tadesse ; Heikinheimo, Annamari ; Villacis, Jose Eduardo ; Sanneh, Bakary ; Malania, Lile ; Nitsche, Andreas ; Brinkmann, Annika ; Saba, Courage Kosi Setsoafia ; Kocsis, Bela ; Solymosi, Norbert ; Thorsteinsdottir, Thorunn R. ; Hatha, Abdulla Mohamed ; Alebouyeh, Masoud ; Morris, Dearbhaile ; O’Connor, Louise ; Cormican, Martin ; Moran-Gilad, Jacob ; Battisti, Antonio ; Alba, Patricia ; Munk, Patrick ; Aarestrup, Frank Møller
in: Scientific Reports, vol: 10, issue: 1

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1038/s41598-020-69869-0

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Source Attribution of Salmonella in Macadamia Nuts to Animal and Environmental Reservoirs in Queensland, Australia

Munck, Nanna Sophia Mucha ; Smith, James ; Bates, John ; Glass, Kathryn ; Hald, Tine ; Kirk, Martyn D
in: Foodborne pathogens and disease, vol: 17, issue: 5, pages: 357-364

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1089/fpd.2019.2706

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Symposium report: One Health meets sequencing

Egli, Adrian ; Koch, Daniel ; Danuser, Jürg ; Hendriksen, Rene S. ; Driesen, Susanne ; Schmid, Diana Coman ; Neher, Richard ; Mäusezahl, Mirjam ; Seth-Smith, Helena Mb ; Bloemberg, Guido ; Tschudin-Sutter, Sarah ; Endimiani, Andrea ; Perreten, Vincent ; Greub, Gilbert ; Schrenzel, Jacques ; Stephan, Roger
in: Microbes and Infection, vol: 22, issue: 1, pages: 1-7

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1016/j.micinf.2019.07.004

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The Analysis of Field Strains Isolated From Food, Animal and Clinical Sources Uncovers Natural Mutations in Listeria monocytogenes Nisin Resistance Genes

Wambui, Joseph ; Eshwar, Athmanya K. ; Aalto-Araneda, Mariella ; Pöntinen, Anna ; Stevens, Marc J.A. ; Njage, Patrick Murigu Kamau ; Tasara, Taurai
in: Frontiers in Microbiology, vol: 11

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.3389/fmicb.2020.549531

 

The association between meat inspection codes, footpad lesions and thinning of broiler flocks in the Danish broiler production

Alfifi, Ahmed ; Dalsgaard, Anders ; Christensen, Jens P. ; Larsen, Marianne Halberg ; Sandberg, Marianne
in: Preventive Veterinary Medicine, vol: 185

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1016/j.prevetmed.2020.105205