Projects from the Genomic Epidemiology Research Group

Udvikling af tids-effektiv DNA-baseret metode til Salmonella serotypning

Aarestrup, Frank Møller; Kjeldgaard, Jette Sejer; Seyfarth, Anne Mette; Otani, Saria; Kaas, Rolf Sommer; Skiby, Jeffrey Edward

Type: Research | Project status: Not started

2019-2019

Infectious Diseases and Whole Genome Sequencing

Rebelo, Ana Rita Bastos; Aarestrup, Frank Møller; Bortolaia, Valeria; Leekitcharoenphon, Pimlapas

Type: PhD | Project status: Active

2018-2021

Bekæmpelse af ESBL producerende, colistin og multiresistente Salmonella og E. coli

Bortolaia, Valeria

Type: Research | Project status: Finished

2016-2016

Tools for source atribution based on ngs data

Munck, Nanna Sophia Mucha; Hald, Tine; de Knegt, Leonardo; Leekitcharoenphon, Pimlapas

Type: PhD | Project status: Active

2015-2019

Detection of Pathogens and Antimicrobial Resistance in Microbiomes

Poulsen, Casper Sahl; Aarestrup, Frank Møller; Kaas, Rolf Sommer; Pamp, Sünje Johanna

Type: PhD | Project status: Active

2015-2019

Ecology from Farm to Fork Of microbial drug Resistance and Transmission

Ribeiro Duarte, Ana Sofia

Type: Research | Project status: Active

2013-2018

The epidemiology of zoonotic antimicrobial resistance in animal production

Dalhoff Andersen, Vibe; Vigre, Håkan; Agersø, Yvonne; de Knegt, Leonardo; Hald, Tine; Dalsgaard, Anders; Emanuelson, Ulf; Dalsgaard, Anders; Emanuelson, Ulf Examiner: Dalsgaard, Anders; Emanuelson, Ulf; Dalsgaard, Anders; Emanuelson, Ulf

Type: PhD | Project status: Finished

2013-2018

Risikorangering af frisk frugt og grønt

Boysen, Louise; Dalhoff Andersen, Vibe; Hald, Tine; Korsgaard, Helle Bisgaard

Type: Research | Project status: Finished

2013-2015

Whole genome based diagnostics and investigations

Aarestrup, Frank Møller; Hasman, Henrik; Lund, Ole; Hammer, Vibeke Dybdahl; Carlsson, Susanne

Type: Research | Project status: Finished

2013-2016

Whole Genome Epidemiological Typing of Salmonella

Leekitcharoenphon, Pimlapas; Aarestrup, Frank Møller; Lund, Ole; Hasman, Henrik; Allard, Marc William; Torpdahl, Mia; Allard, Marc William; Torpdahl, Mia Examiner: Allard, Marc William; Torpdahl, Mia; Allard, Marc William; Torpdahl, Mia

Type: PhD | Project status: Finished

2011-2014

Whole Genome Epidemilogical Typing Of Escherichia Coli

Kaas, Rolf Sommer; Aarestrup, Frank Møller; Lund, Ole; Ussery, David; Hendriksen, Rene S.; Krogh, Anders Stærmose; Underwood, Anthony Examiner: Underwood, Anthony

Type: PhD | Project status: Finished

2010-2015

Development of high-throughput typing method for bacterial genome prediction

Lukjancenko, Oksana; Ussery, David; Larsen, Mette Voldby; Jarmer, Hanne Østergaard; Gilna, Paul; Tolstrup, Niels Examiner: Gilna, Paul

Type: PhD | Project status: Finished

2010-2014

Metagenomics of novel environments and establishment of a proteolytic enzyme prediction tool

Vogt, Josef Korbinian; Sicheritz-Pontén, Thomas; Lund, Ole; Ahrén, Dag Gustaf; Andersen, Jan Buch; Ahrén, Dag Gustaf; Andersen, Jan Buch Examiner: Ahrén, Dag Gustaf; Andersen, Jan Buch; Ahrén, Dag Gustaf; Andersen, Jan Buch

Type: PhD | Project status: Finished

2010-2014

The interpretation of quantitative microbiology data: meeting the demands of quantitative microbiological risk assessment

Ribeiro Duarte, Ana Sofia; Nauta, Maarten; Aabo, Søren; Vigre, Håkan; Dalgaard, Paw; Evers, Eric; Nørrung, Birgit Examiner: Evers, Eric

Type: PhD | Project status: Finished

2010-2013

Characterization of microbial growth and adaption in models of human lungs

Weiss Nielsen , Martin ; Sternberg, Claus; Geschke, Oliver; Molin, Søren; Jelsbak, Lars; Bjarnsholt, Thomas; Stoodley, Paul Examiner: Stoodley, Paul

Type: PhD | Project status: Finished

2008-2012