Projects from the Genomic Epidemiology Research Group

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Munck, Nanna Sophia Mucha; Hald, Tine; de Knegt, Leonardo; Leekitcharoenphon, Pimlapas; Lund, Ole; Mughini-Gras, Lapo; Sandberg, Marianne Examiner: Mughini-Gras, Lapo

Type: PhD    |     Project status: Finished

2015-2019

Detection of Pathogens and Antimicrobial Resistance in Microbiomes

Poulsen, Casper Sahl; Aarestrup, Frank Møller; Kaas, Rolf Sommer; Pamp, Sünje Johanna; Vigre, Håkan; Gilbert, M. Thomas P.; Höper, Dirk Examiner: Gilbert, M. Thomas P.; Höper, Dirk

Type: PhD    |     Project status: Finished

2015-2019

Interactions Between the Microbiome and Host Immune System

Masche, Anna Cäcilia; Pamp, Sünje Johanna; Aarestrup, Frank Møller; Müller, Klaus Gottlob; Licht, Tine Rask; Andersen, Paal Skytt; van den Brink, Marcel; Lund, Ole Superv.: Müller, Klaus Gottlob
Examiner: Andersen, Paal Skytt; van den Brink, Marcel

Type: PhD    |     Project status: Finished

2015-2019

Development bioinformatics tools for wine fermentation, wine quality and wine health

Klincke, Franziska; Pedersen, Anders Gorm; Rasmussen, Simon; Petersen, Thomas Nordahl; Priemé, Anders; Gilbert, M.Thomas P.; Wales, Nathan Superv.: Gilbert, M.Thomas P.
Examiner: Priemé, Anders; Wales, Nathan

Type: PhD    |     Project status: Finished

2015-2019

Veterinary Epidemiology - biological models of vector borne diseases

Haider, Najmul; Bødker, Rene; Kjær, Lene Jung; Toft, Nils; Vigre, Håkan; Lindström, Anders Åke; Mortensen, Sten Examiner: Lindström, Anders Åke; Mortensen, Sten

Type: PhD    |     Project status: Finished

2015-2018

Benchmarking of phylogeny methods based on whole genome sequencing

Ahrenfeldt, Johanne; Hasman, Henrik; Marcatili, Paolo; Pettengill, James B.; Litrup, Eva; Lund, Ole Examiner: Pettengill, James B.; Litrup, Eva

Type: PhD    |     Project status: Finished

2014-2018

Diagnostic use of Microbial Whole Genome Sequencing (WGS)

Tetzschner, Anna Maria Malberg; Aarestrup, Frank Møller; Pamp, Sünje Johanna; Lund, Ole; Petersen, Thomas Nordahl; Kemp, Michael; Underwood, Anthony Examiner: Kemp, Michael; Underwood, Anthony

Type: PhD    |     Project status: Finished

2014-2020

High Performance Machine Learning Methods applied within Bioinformatics

Jurtz, Vanessa Isabell; Nielsen, Morten; Winther, Ole; Petersen, Thomas Nordahl; Gfeller, David; Buus, Søren; Lund, Ole Examiner: Gfeller, David; Buus, Søren

Type: PhD    |     Project status: Finished

2014-2018

Rapid computational identification and clucidation of infectious desease outbreak

Thomsen, Martin Christen Frølund; Aarestrup, Frank Møller; Petersen, Bent; Dallman, Tim; Hansen, Dennis Schrøder; Lund, Ole Examiner: Dallman, Tim; Hansen, Dennis Schrøder

Type: PhD    |     Project status: Finished

2014-2018

The structure and functional role of microbial communities in rapid sand filters

Palomo, Alejandro; Sicheritz-Pontén, Thomas; Rasmussen, Simon; Smets, Barth F.; Petersen, Thomas Nordahl; Daims, Holger; Thamdrup, Bo Examiner: Daims, Holger; Thamdrup, Bo

Type: PhD    |     Project status: Finished

2014-2017

Genomic antimicrobial resistance, prediction of functionality, resistance gene mobility and zoonotic relevance

Munk, Patrick; Aarestrup, Frank Møller; Agersø, Yvonne; Vigre, Håkan; Bahl, Martin Iain; van Schaik, Willem; Hansen, Lars H. Examiner: van Schaik, Willem; Hansen, Lars H.

Type: PhD    |     Project status: Finished

2013-2018

2013-2017

2013-2018

Biomarkers and their use in age-related disease prediction - exploring risk factors for development of Alzheimer's disease

Neergaard, Jesper; Workman, Christopher; Pedersen, Susanne Brix; Lund, Ole; Christiansen, Lene; Solomon, Alina; Henriksen, Kim; Karsdal, Morten A. Superv.: Henriksen, Kim; Karsdal, Morten A.
Examiner: Christiansen, Lene; Solomon, Alina

Type: PhD    |     Project status: Finished

2013-2017

Development of a recombinant antibody-based treatment of snakebites

Engmark, Mikael; De Masi, Federico; Marcatili, Paolo; Billiald, Philippe; Andersen, Mikael Rørdam; Buus, Søren; Lund, Ole Examiner: Billiald, Philippe; Buus, Søren

Type: PhD    |     Project status: Finished

2013-2017

The epidemiology of zoonotic antimicrobial resistance in animal production

Dalhoff Andersen, Vibe; Vigre, Håkan; Agersø, Yvonne; de Knegt, Leonardo; Hald, Tine; Dalsgaard, Anders; Emanuelson, Ulf Examiner: Dalsgaard, Anders; Emanuelson, Ulf

Type: PhD    |     Project status: Finished

2013-2018

Autoimmunity Upside-down; Investigation and Identification of Auto-antigens in Autoimmune diseases - a Better Understanding of the Autoimmune Origin

Mortensen, Joachim Høg; Hägglund, Per; Bay-Jensen, Anne-Christine; Lund, Ole; Hvas, Christian Lodberg; Vermeire, Severine A. R. A. Superv.: Bay-Jensen, Anne-Christine
Examiner: Hvas, Christian Lodberg; Vermeire, Severine A. R. A.

Type: PhD    |     Project status: Finished

2013-2017

Tailored Design of Innovative Vaccine against PRRSV

Welner, Simon; Rasmussen, Thomas Bruun; Lundegaard, Claus; Graham, Simon Paul; Lund, Ole; Jungersen, Gregers; Larsen, Lars Erik Examiner: Graham, Simon Paul

Type: PhD    |     Project status: Finished

2013-2017

https://www.food.dtu.dk/english/research/genomic-epidemiology/projects?dtulistcode=National%20Food%20Instit-33440&fr=26&mr=25&qt=DtuProjectQuery&sorton=startdate
28 MARCH 2020