Publikationer fra forskningsgruppen for Genetisk epidemiologi

Antimicrobial resistance in hospital wastewater in Scotland: a cross-sectional metagenomics study

Perry, Meghan ; van Bunnik, Bram ; McNally, Luke ; Wee, Bryan ; Munk, Patrick ; Warr, Amanda ; Moore, Barbara ; Kalima, Pota ; Philip, Carol ; de Roda Husman, Ana Maria ; Aarestrup, Frank Møller ; Woolhouse, Mark
in: Lancet, vol: 394, pages: S1

Type: Conference abstract in journal (Peer reviewed)

Status: Published | År: 2019 | DOI: https://doi.org/10.1016/s0140-6736(19)32798-9

Economic hardship over twenty-two consecutive years of adult life and markers of early ageing

Foverskov, E. ; Petersen, G. L. ; Pedersen, Jolene Lee Masters ; Rod, N . H. ; Mortensen, E. L. ; Bruunsgaard, H. ; Lund, R.
in: European Journal of Public Health, vol: 29, issue: Supplement 4, pages: 38-38
Presented at: 12th European Public Health Conference

Type: Conference abstract in journal (Peer reviewed)

Status: Published | År: 2019 | DOI: https://doi.org/10.1093/eurpub/ckz185.085

Environmental surveillance and genomic characterization of Vibrio cholerae O1 from fish, phytoplankton and water in Lake Victoria

Hounmanou, Y. M. G. ; Leekitcharoenphon, Pimlapas ; Hendriksen, Rene S. ; Dougnon, T. V. ; Mdegela, R. H. ; Olsen, John ; Dalsgaard, Anders
part of: 13th DWF Water Research Conference - Abstracts, pages: 52-52, 2019, University of Copenhagen, Frederiksberg C
Presented at: 13th Annual Water Research Conference

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published | År: 2019

Zoonoses in the Bolivian Amazon: alarming initial results from an NGO-led one health initiative

Robles, E. Alandia ; Martinez, E. ; Voigt, D. Arteaga ; Durán, P. ; Hald, Tine ; Quispe, E. ; Salazar, C. ; Salas, A. ; Nielsen, L. R.
in: International Journal of Infectious Diseases, vol: 79, issue: Suppl. 1, pages: 5-6
Presented at: International Meeting on Emerging Diseases and Surveillance (IMED) 2016

Type: Conference abstract in journal (Peer reviewed)

Status: Published | År: 2019 | DOI: https://doi.org/10.1016/j.ijid.2018.11.032

AnOxPe-pred: Using deep learning for the prediction of antioxidative properties of peptides.

Olsen, Tobias Hegelund ; Pertseva, Margarita ; García Moreno, Pedro Jesús ; Jacobsen, Charlotte ; Lund, Ole ; Hansen, Egon Bech ; Marcatili, Paolo
part of: Sustain Conference 2018, 2018, Technical University of Denmark, Lyngby, Denmark
Presented at: Sustain conference 2018: Creating Technology for a Sustainable Society

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published | År: 2018

Growth potential of pathogens in reverse osmosis filtrated whey intended for water re-use in cheese production

Hellmér, Maria ; Buschhardt, Tasja ; Njage, Patrick Murigu Kamau ; Hansen, Tina Beck ; Aabo, Søren
part of: The Danish Microbiological Society Annual Congress 2018 - programme & abstracts, pages: 50-50, 2018, Danish Microbiological Society, Copenhagen, Denmark
Presented at: The Danish Microbiological Society Annual Congress 2018

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published | År: 2018

Presence of extended-spectrum cephalosporin (ESC) resistance Escherichia coli in two Danish poultry slaughterhouses

Jensen, Lars Bogø ; Birk, Tina ; Hendriksen, Rene S. ; Leekitcharoenphon, Pimlapas ; Ortved, Gitte ; Lundsby, Katrine ; Jørgensen, Bettina ; Aabo, Søren
part of: The Danish Microbiological Society Annual Congress 2018 - programme & abstracts, pages: 78-78, 2018, Danish Microbiological Society, Copenhagen, Denmark
Presented at: The Danish Microbiological Society Annual Congress 2018

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published | År: 2018

Analysis of 28 Arcobacter genomes belonging to different species

Alba, Pérez-Cataluña ; Leekitcharoenphon, Pimlapas ; Hendriksen, Rene S. ; Aarestrup, Frank Møller ; José, Figueras Maria
part of: 19th International Workshop on Campylobacter, Helicobacter and Related Organisms: CHRO 2017 - Abstract Book, pages: 213-213, 2017, Nantes, France
Presented at: 19th International Workshop on Campylobacter, Helicobacter and Related Organisms

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published | År: 2017

Hospital epidemiology of methicillin-resistant Staphylococcus aureus (MRSA) in a tertiary care hospital in Moshi Tanzania as determined by whole genome sequencing

Kumburu, H. H. ; Sonda, T. ; Leetcharoenphon, P. ; van Zwetselaar, M. ; Lukjancenko, Oksana ; Alifrangis, M. ; Lund, Ole ; Mmbaga, B. T. ; Kibiki, G. ; Aarestrup, Frank Møller
in: Tropical Medicine & International Health, vol: 22, issue: S1, pages: 359-359
Presented at: 10th European Congress on Tropical Medicine and International Health

Type: Conference abstract in journal (Peer reviewed)

Status: Published | År: 2017

Meta-analysis of proportion estimates of extended-spectrum-beta-lactamase-producing Enterobacteriaceae in East Africa hospitals

Sonda, T. ; Kumburu, H. ; van Zwetselaar, M. ; Alifrangis, M. ; Lund, Ole ; Kibiki, G. ; Aarestrup, M. Frank F.
in: Tropical Medicine & International Health, vol: 22, issue: Suppl. 1, pages: 34

Type: Conference abstract in journal (Peer reviewed)

Status: Published | År: 2017

Patterns of infections, aetiological agents, and antimicrobial resistance at a tertiary care hospital in northern Tanzania

Kumburu, H. H. ; Sonda, T. ; Mmbaga, B. T. ; Alifrangis, M. ; Lund, Ole ; Kibiki, G. ; Aarestrup, Frank Møller
in: Tropical Medicine & International Health, vol: 22, issue: S1, pages: 360-360
Presented at: 10th European Congress on Tropical Medicine and International Health

Type: Conference abstract in journal (Peer reviewed)

Status: Published | År: 2017

Prevalence and risk factors of CTX-M Enterobacteriaceae in hospitalised patients at a tertiary hospital in Kilimanjaro, Tanzania

Sonda, T. ; Kumburu, H. ; van Zwetselaar, M. ; Alifrangis, M. ; Mmbaga, B. ; Lund, Ole ; Aarestrup, Frank Møller ; Kibiki, G.
in: Tropical Medicine & International Health, vol: 22, issue: Suppl. 1, pages: 187
Presented at: 10th European Congress on Tropical Medicine and International Health

Type: Conference abstract in journal (Peer reviewed)

Status: Published | År: 2017

”Recycled paper for food packaging: burden of disease methodology to link sustainability and safety“

Boriani, Elena ; Pieke, Eelco Nicolaas ; Hald, Tine ; Pires, Sara Monteiro ; Boberg, Julie ; Jakobsen, Lea Sletting
part of: Book of Abstracts, Sustain 2017, 2017, Technical University of Denmark
Presented at: Sustain 2017

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published | År: 2017

TEACH FOOD – Developing a teacher’s community of practice

Duedahl-Olesen, Lene ; Vigre, Håkan ; Andersson, Pernille Hammar ; Jensen, Lars Bogø
part of: Proceedings of the ETALEE 2017 Conference, pages: 48-57, 2017, SDU Odense
Presented at: ETALEE 2017

Type: Article in proceedings (Peer reviewed)

Status: Published | År: 2017

Transmission of extended-spectrum cephalosporin (ESC) resistance through the broiler production system in Denmark

Jensen, Lars Bogø ; Birk, Tina ; Hendriksen, Rene S. ; Ortved Bjergager, Gitte ; Lundsby, Kartrine ; Aabo, Søren
part of: The Danish Microbiological Society Annual Congress 2017 - Programme & Abstracts, pages: 83-83, 2017, American Society for Microbiology, Copenhagen, Denmark
Presented at: Danish Microbiological Society 2017 Congress

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published | År: 2017

Viral indicators for fecal contamination - a one-year viral metagenomic study of treatment efficiency in danish waste water treatment plants

Hellmér, Maria ; Stranddorf, Kasper ; Seidel, Michael ; Aarestrup, Frank Møller ; Schultz, Anna Charlotte
part of: The Danish Microbiological Society Annual Congress 2017 - Programme & Abstracts, pages: 63-63, 2017, American Society for Microbiology, Copenhagen, Denmark
Presented at: Danish Microbiological Society 2017 Congress

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published | År: 2017

High-throughput epitope profiling of snake venom toxins

Engmark, Mikael ; Andersen, Mikael Rørdam ; Laustsen, Andreas Hougaard ; Patel, Jigar ; Sullivan, Eric ; De Masi, Federico ; Hansen, Christian Skjødt ; Kringelum, Jens Vindahl ; Lomonte, Bruno ; Gutiérrez, José María ; Lund, Ole
Presented at: The 12th Congress of the Pan-American Section of the International Society on Toxinology

Type: Poster (Peer reviewed)

Status: Published | År: 2016

Spatial patterns of Antimicrobial Resistance Genes in Danish Pig Farms

Birkegård, Anna Camilla ; Ersbøll, A. K. ; Hisham Beshara Halasa, Tariq ; Clasen, Julie ; Folkesson, Anders ; Vigre, Håkan ; Toft, Nils
part of: Proceedings of the SVEPM: Annual Meeting 2016, pages: 182-191, 2017
Presented at: SVEPM

Type: Article in proceedings (Peer reviewed)

Status: Published | År: 2016

WherEvaluation of methods for the concentration and extraction of viruses from sewage water in the context of metagenomic sequencing

Hellmér, Maria ; Hjelmsø, Mathis Hjort ; Fernandez-Cassi, Xavier ; Timoneda, Natalia ; Lukjancenko, Oksana ; Seidel, Michael ; Aarestrup, Frank Møller ; Löfström, Charlotta ; Girones, Rosina ; Schultz, Anna Charlotte
part of: The Danish Microbiological Society Annual Congress 2016, pages: 76-76, 2016, American Society for Microbiology, Copenhagen
Presented at: Danish Microbiological Society Annual Congress 2016

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published | År: 2016

Accounting for Campylobacter biology and epidemiology in source attribution modelling

Boysen, Louise ; Rosenquist, H. ; Hald, Tine
part of: Proceedings of the 18th International workshop on Campylobacter, Helicobacter & Related Organisms - CHRO 2015, pages: 141-141, 2015, New Zealand
Presented at: 18th International Workshop on Campylobacter, Helicobacter and Related Organisms

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published | År: 2015

Epitopic Profiling of Antibody Response against Neurotoxins from the Black Mamba (Dendroaspis polylepis)

Jespersen, Martin Closter ; Engmark, Mikael ; Laustsen, Andreas Hougaard ; Marfa Gutierrez, Jose ; Lomonte, Bruno ; Andersen, Mikael Rørdam ; Lund, Ole
Presented at: Symposium for Biological and Life Science Students (SymBLS) 2015

Type: Poster (Peer reviewed)

Status: Published | År: 2015

Genomic Epidemiology

Lund, Ole ; Thomsen, Martin ; Bellod Cisneros, Jose Luis ; Ahrenfeldt, Johanne ; Tetzschner, Anna Maria Malberg ; Leekitcharoenphon, Shinny ; Kaas, Rolf Sommer ; Lukjancenko, Oksana ; Aarestrup, Frank
part of: Book of Abstracts. DTU's Sustain Conference 2015, 2015, Technical University of Denmark, Lyngby
Presented at: DTU Sustain Conference 2015

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published | År: 2015

High-throughput epitope identification for snakebite antivenom

Engmark, Mikael ; De Masi, Federico ; Laustsen, Andreas Hougaard ; Gutiérrez, José María ; Lomonte, Bruno ; Andersen, Mikael Rørdam ; Lund, Ole
Presented at: The International Sustainability Conference 2015

Type: Poster (Peer reviewed)

Status: Published | År: 2015

Integrated Food Security: mapping and selecting different indicators and metrics from sustainability till safety, pig product case study

Boriani, Elena ; Hald, Tine
part of: Book of Abstracts. DTU's Sustain Conference 2015, 2015, Technical University of Denmark, Lyngby
Presented at: DTU Sustain Conference 2015

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published | År: 2015

Investigating Antivenom Function and Cross-Reactivity – a Study of Antibodies and Their Targets

Engmark, Mikael ; De Masi, Federico ; Andersen, Mikael Rørdam ; Laustsen, Andreas Hougaard ; Gutiérrez, José María ; Lomonte, Bruno ; Lund, Ole
Presented at: 12th Protein.DTU Workshop

Type: Poster (Peer reviewed)

Status: Published | År: 2015