Publikationer fra forskningsgruppen for Genetisk epidemiologi

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2020
 

Using novel methodologies to support burden of disease estimates

Hald, Tine
in: European Journal of Public Health, vol: 30, issue: Suppl. 5, pages: 350-351
Presented at:
16th World Congress on Public Health 2020

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    År: 2020     |    DOI: https://doi.org/10.1093/eurpub/ckaa165.951

2019
 

Antimicrobial resistance in hospital wastewater in Scotland: a cross-sectional metagenomics study

Perry, Meghan ; van Bunnik, Bram ; McNally, Luke ; Wee, Bryan ; Munk, Patrick ; Warr, Amanda ; Moore, Barbara ; Kalima, Pota ; Philip, Carol ; de Roda Husman, Ana Maria ; Aarestrup, Frank Møller ; Woolhouse, Mark
in: Lancet, vol: 394, pages: S1

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1016/s0140-6736(19)32798-9

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Economic hardship over twenty-two consecutive years of adult life and markers of early ageing

Foverskov, E. ; Petersen, G. L. ; Pedersen, Jolene Lee Masters ; Rod, N . H. ; Mortensen, E. L. ; Bruunsgaard, H. ; Lund, R.
in: European Journal of Public Health, vol: 29, issue: Supplement 4, pages: 38-38
Presented at:
12th European Public Health Conference

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1093/eurpub/ckz185.085

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Environmental surveillance and genomic characterization of Vibrio cholerae O1 from fish, phytoplankton and water in Lake Victoria

Hounmanou, Y. M. G. ; Leekitcharoenphon, Pimlapas ; Hendriksen, Rene S. ; Dougnon, T. V. ; Mdegela, R. H. ; Olsen, John ; Dalsgaard, Anders
part of: 13th DWF Water Research Conference - Abstracts, pages: 52-52, 2019, Frederiksberg C
Presented at:
13th Annual Water Research Conference

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2019

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Zoonoses in the Bolivian Amazon: alarming initial results from an NGO-led one health initiative

Robles, E. Alandia ; Martinez, E. ; Voigt, D. Arteaga ; Durán, P. ; Hald, Tine ; Quispe, E. ; Salazar, C. ; Salas, A. ; Nielsen, L. R.
in: International Journal of Infectious Diseases, vol: 79, issue: Suppl. 1, pages: 5-6
Presented at:
International Meeting on Emerging Diseases and Surveillance (IMED) 2016

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1016/j.ijid.2018.11.032

2018
 

AnOxPe-pred: Using deep learning for the prediction of antioxidative properties of peptides.

Olsen, Tobias Hegelund ; Pertseva, Margarita ; García Moreno, Pedro Jesús ; Jacobsen, Charlotte ; Lund, Ole ; Hansen, Egon Bech ; Marcatili, Paolo
part of: Sustain Conference 2018, 2018, Lyngby, Denmark
Presented at:
Sustain conference 2018: Creating Technology for a Sustainable Society

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2018

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Growth potential of pathogens in reverse osmosis filtrated whey intended for water re-use in cheese production

Hellmér, Maria ; Buschhardt, Tasja ; Njage, Patrick Murigu Kamau ; Hansen, Tina Beck ; Aabo, Søren
part of: The Danish Microbiological Society Annual Congress 2018 - programme & abstracts, pages: 50-50, 2018, Copenhagen, Denmark
Presented at:
The Danish Microbiological Society Annual Congress 2018

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2018

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Presence of extended-spectrum cephalosporin (ESC) resistance Escherichia coli in two Danish poultry slaughterhouses

Jensen, Lars Bogø ; Birk, Tina ; Hendriksen, Rene S. ; Leekitcharoenphon, Pimlapas ; Ortved, Gitte ; Lundsby, Katrine ; Jørgensen, Bettina ; Aabo, Søren
part of: The Danish Microbiological Society Annual Congress 2018 - programme & abstracts, pages: 78-78, 2018, Copenhagen, Denmark
Presented at:
The Danish Microbiological Society Annual Congress 2018

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2018

2017
  PDF

Analysis of 28 Arcobacter genomes belonging to different species

Alba, Pérez-Cataluña ; Leekitcharoenphon, Pimlapas ; Hendriksen, Rene S. ; Aarestrup, Frank Møller ; José, Figueras Maria
part of: 19th International Workshop on Campylobacter, Helicobacter and Related Organisms: CHRO 2017 - Abstract Book, pages: 213-213, 2017, Nantes, France
Presented at:
19th International Workshop on Campylobacter, Helicobacter and Related Organisms

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2017

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Characterization of C. jejuni and C. coli broiler isolates by whole genome sequencing

Cantero, G. ; Correa-Fiz, F. ; Ronco, Troels ; Strube, Mikael Lenz ; Cerdà-Cuéllar, M. ; Pedersen, Karl
Presented at:
19th International Workshop on Campylobacter, Helicobacter and Related Organisms

Type: Poster (Peer reviewed)

Status: Published     |    År: 2017

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Characterization of C. jejuni and C. coli broiler isolates by whole genome sequencing

Guillermo, Cantero ; Florencia, Correa-Fiz ; Ronco, Troels ; Strube, Mikael Lenz ; Cerda-Cuellar, Marta ; Pedersen, Karl
part of: 19th International Workshop on Campylobacter, Helicobacter and Related Organisms: CHRO 2017 - Abstract Book, pages: 299-299, 2017, Nantes, France
Presented at:
19th International Workshop on Campylobacter, Helicobacter and Related Organisms

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2017

 

Hospital epidemiology of methicillin-resistant Staphylococcus aureus (MRSA) in a tertiary care hospital in Moshi Tanzania as determined by whole genome sequencing

Kumburu, H. H. ; Sonda, T. ; Leetcharoenphon, P. ; van Zwetselaar, M. ; Lukjancenko, Oksana ; Alifrangis, M. ; Lund, Ole ; Mmbaga, B. T. ; Kibiki, G. ; Aarestrup, Frank Møller
in: Tropical Medicine & International Health, vol: 22, issue: S1, pages: 359-359
Presented at:
10th European Congress on Tropical Medicine and International Health

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    År: 2017

 

Meta-analysis of proportion estimates of extended-spectrum-beta-lactamase-producing Enterobacteriaceae in East Africa hospitals

Sonda, T. ; Kumburu, H. ; van Zwetselaar, M. ; Alifrangis, M. ; Lund, Ole ; Kibiki, G. ; Aarestrup, M. Frank F.
in: Tropical Medicine & International Health, vol: 22, issue: Suppl. 1, pages: 34

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    År: 2017

 

Patterns of infections, aetiological agents, and antimicrobial resistance at a tertiary care hospital in northern Tanzania

Kumburu, H. H. ; Sonda, T. ; Mmbaga, B. T. ; Alifrangis, M. ; Lund, Ole ; Kibiki, G. ; Aarestrup, Frank Møller
in: Tropical Medicine & International Health, vol: 22, issue: S1, pages: 360-360
Presented at:
10th European Congress on Tropical Medicine and International Health

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    År: 2017

 

Prevalence and risk factors of CTX-M Enterobacteriaceae in hospitalised patients at a tertiary hospital in Kilimanjaro, Tanzania

Sonda, T. ; Kumburu, H. ; van Zwetselaar, M. ; Alifrangis, M. ; Mmbaga, B. ; Lund, Ole ; Aarestrup, Frank Møller ; Kibiki, G.
in: Tropical Medicine & International Health, vol: 22, issue: Suppl. 1, pages: 187
Presented at:
10th European Congress on Tropical Medicine and International Health

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    År: 2017

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”Recycled paper for food packaging: burden of disease methodology to link sustainability and safety“

Boriani, Elena ; Pieke, Eelco Nicolaas ; Hald, Tine ; Pires, Sara Monteiro ; Boberg, Julie ; Jakobsen, Lea Sletting
part of: Book of Abstracts, Sustain 2017, 2017
Presented at:
Sustain 2017

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2017

  PDF

TEACH FOOD – Developing a teacher’s community of practice

Duedahl-Olesen, Lene ; Vigre, Håkan ; Andersson, Pernille Hammar ; Jensen, Lars Bogø
part of: Proceedings of the ETALEE 2017 Conference, pages: 48-57, 2017
Presented at:
ETALEE 2017

Type: Article in proceedings (Peer reviewed)

Status: Published     |    År: 2017

  PDF

Transmission of extended-spectrum cephalosporin (ESC) resistance through the broiler production system in Denmark

Jensen, Lars Bogø ; Birk, Tina ; Hendriksen, Rene S. ; Ortved Bjergager, Gitte ; Lundsby, Kartrine ; Aabo, Søren
part of: The Danish Microbiological Society Annual Congress 2017 - Programme & Abstracts, pages: 83-83, 2017, Copenhagen, Denmark
Presented at:
Danish Microbiological Society 2017 Congress

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2017

  PDF

Viral indicators for fecal contamination - a one-year viral metagenomic study of treatment efficiency in danish waste water treatment plants

Hellmér, Maria ; Stranddorf, Kasper ; Seidel, Michael ; Aarestrup, Frank Møller ; Schultz, Anna Charlotte
part of: The Danish Microbiological Society Annual Congress 2017 - Programme & Abstracts, pages: 63-63, 2017, Copenhagen, Denmark
Presented at:
Danish Microbiological Society 2017 Congress

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2017

2016
  PDF

Genomic characterization of avian pathogenic escherichia coli isolates from nordic broiler production reveals a major st117 O78:H4 lineage

Ronco, Troels ; Stegger, Marc ; Olsen, Rikke Heidemann ; Lilje, Berit ; Pohjanvirta, Tarja ; Sekse, Camilla ; Bang Nordstoga, Anne ; Andersen, Paal Skytt ; Pedersen, Karl
part of: The Danish Microbiological Society Annual Congress 2016, pages: 67-67, 2016, Copenhagen
Presented at:
Danish Microbiological Society Annual Congress 2016

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2016

  PDF

High-throughput epitope profiling of snake venom toxins

Engmark, Mikael ; Andersen, Mikael Rørdam ; Laustsen, Andreas Hougaard ; Patel, Jigar ; Sullivan, Eric ; De Masi, Federico ; Hansen, Christian Skjødt ; Kringelum, Jens Vindahl ; Lomonte, Bruno ; Gutiérrez, José María ; Lund, Ole
Presented at:
The 12th Congress of the Pan-American Section of the International Society on Toxinology

Type: Poster (Peer reviewed)

Status: Published     |    År: 2016

  PDF

Sequencing of avian pathogenic Escherichia coli from a colibacillosis outbreak

Pohjanvirta, Tarja ; Ronco, Troels ; Pelkonen, Sinikka ; Pedersen, Karl
Presented at:
2nd Conference Rapid Microbial NGS and Bioinformatics

Type: Poster (Peer reviewed)

Status: Published     |    År: 2016

 

Spatial patterns of Antimicrobial Resistance Genes in Danish Pig Farms

Birkegård, Anna Camilla ; Ersbøll, A. K. ; Hisham Beshara Halasa, Tariq ; Clasen, Julie ; Folkesson, Anders ; Vigre, Håkan ; Toft, Nils
part of: Proceedings of the SVEPM: Annual Meeting 2016, pages: 182-191, 2017
Presented at:
SVEPM

Type: Article in proceedings (Peer reviewed)

Status: Published     |    År: 2016

  PDF

WherEvaluation of methods for the concentration and extraction of viruses from sewage water in the context of metagenomic sequencing

Hellmér, Maria ; Hjelmsø, Mathis Hjort ; Fernandez-Cassi, Xavier ; Timoneda, Natalia ; Lukjancenko, Oksana ; Seidel, Michael ; Aarestrup, Frank Møller ; Löfström, Charlotta ; Girones, Rosina ; Schultz, Anna Charlotte
part of: The Danish Microbiological Society Annual Congress 2016, pages: 76-76, 2016, Copenhagen
Presented at:
Danish Microbiological Society Annual Congress 2016

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2016

2015
  PDF

Accounting for Campylobacter biology and epidemiology in source attribution modelling

Boysen, Louise ; Rosenquist, H. ; Hald, Tine
part of: Proceedings of the 18th International workshop on Campylobacter, Helicobacter & Related Organisms - CHRO 2015, pages: 141-141, 2015, New Zealand
Presented at:
18th International Workshop on Campylobacter, Helicobacter and Related Organisms

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    År: 2015